Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQTKKEFILGLTIIITLTLLIMLIFLVMFNKSSNSKLKQTKDRRVLSTSTTRTSSSSHDQKIVEKSLEKKKMVMEQDMELMNAYRLYYDYAHLSLKEVVLAYMSEYGIEKNSVAFSYKNLKTGQRDAMNDTQAMTAGSTYKLPLNMLVVDAVVKGKLSMEERFDITETDY-EYIGEHNNYVAAFSGAMSIDDMQKYSLVYSENTPAYALAERIGGMDSAYSKFGRYGQSKGDIKNI---------QKNGNKVTTDYYIQVLDYLWKHR----KKYDSLITYLEEAFPTD-YYRALIPSDVVVAQKPGYV-REALNVGAIVK-E-EVPYIVAIYTAGLGGSTQEDSEINGVGLYQLEQLCFVINQWHRVNMN |
| 3QHY Chain:A ((29-288)) | -----------------------------------------------------------------------------------------------THKEFSQLEKKF---DARLGVYAIDTGTNQTIAYRPNERFAFASTYKALAAGVLLQQNST--KKLDEVITYTKEDLVDYSPVTEKH---VDTGMTLGEIAEAAVRYSDNTAGNILFHKIGGPKGYEKALRQMGDRVTMSDRFETELNEAIPGDIRDTSTAKAIATNLKAFTAGNALPNHKRNILTKWMKGNATGDKLIRAGVPTNWVVADKSGAGSYGTRNDIAIVWPPNRAPIIIAILSSKDEKGATYDNQL----IAEAAEVIVNAFR------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QHY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -118348 for 2059 contacts (-57.5/contact) +
2D Compatibility (PS) -24854 + (NN) 296 + (LL) 9704
1D Compatibility (HY) -4800 + (ID) 2150
Total energy: -140152.0 ( -68.07 by residue)
QMean score : 0.351
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