Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MFK--FLKRLIALIIIIFIG------------------------------------------YRLVIIH------------ENVKKVLQYHDL---VQNTLAENGSEANVHLVL-SMIYTETKGDAIDVMQSSESISGTTN-----SITDSHTSIKHGVTLLSQNISQAKKAKV------DVWTAVQAYNFGSSYID------YVADHGGENSIELAKNYSKNV---VAPSLGNYNGDTYFYYHPLALISGGKLYKNGGN------IYY------SREVQFNLYLIKIMELF |
| 1GC1 Chain:G ((12-321)) | TENFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVGAGSCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNNKTFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEVVIRSVNFTDNAKTIIVQLNTSVEINCTGAGHCNISRAKWNNTLKQIASKLREQFGNNKTIIFKQSSGGDPEIVTHSFNCGGEFFYCNSTQLFNSTWFGSDTITLPCRIKQIINMWQKVGKAMYAPPISGQIRCSSNITGLLLTRDGGNSNNESEIFRPGGGDMRDNWRSELYKYKVVKIE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GC1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -50509 for 1256 contacts (-40.2/contact) +
2D Compatibility (PS) -19917 + (NN) 6862 + (LL) 0
1D Compatibility (HY) -8400 + (ID) 2150
Total energy: -74114.0 ( -59.01 by residue)
QMean score : 0.159
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