Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIMDKSIPKATAKRLSLYYRIFKRFNTDGIEKASSKQIADALGIDSATVRRDFSYFGELGRRGFGYDVKKLMNFFAEILNDHSTTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSN-DLVGKTT-EDGIPVYGISTINDHLIDSDIETAILTVPSTEAQEVADILVKAGIKGILSFSPVHLTLPKDIIVQYVDLTSELQTLLYFMNQQR
3KEO Chain:A ((6-212))
-----SIPKATAKRLSLYYRIFKRFNTDGIEKASSKQIADALGIDSATVRRDFSYFGELGRRGFGYDVKKLMNFFAEILNDHSTTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSNDL-VGKTTED-GIPVYGISTINDHL-DSDIETAILTVPSTEAQEVADILVKAGIKGILSFSPVHLTLPKDIIVQYVDLTSELQTLLYFMNQQR
General information:
TITO was launched using:
RESULT:
Template:
3KEO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -154994 for 1466 contacts (-105.7/contact) +
2D Compatibility (PS) -22709 + (NN) -12311 + (LL) 912
1D Compatibility (HY) -30000 + (ID) 10100
Total energy: -229202.0 ( -156.35 by residue)
QMean score : 0.729
(partial model without unconserved sides chains):
PDB file :
Tito_3KEO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KEO-query.scw
PDB file :
Tito_Scwrl_3KEO.pdb
: