Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIIYLGLACVSILTLSGCESIERSLKGDRYVDQKLAENSSKEATEQLNKKTKQALKADKKAFPQLDKAVAKNEAQVLIKTSKGDINIKLFPKYAPLAVENFLTHAKEGYYNGLSFHRVIKDFMIQSGDPNGDGTGGKSIWNSKDKKKDSGNGFVNEISPYLYNIRGSLAMA-NAGADTNGSQFFINQSQQ---DHSKQLSDKKVPKVIIKAYSEGGNPSLDGGYTVFGQVISGMETVDKIASVEVTK----SDQPKEKITITSIKVIKDYKFK |
| 1VAI Chain:B ((1-165)) | -----------------------------------------------------------------------AKGDPHVLLTTSAGNIELELDKQKAPVSVQNFVDYVNSGFYNNTTFHRVIPGFMIQGGG-----------FTEQMQQKKPNPPIKNEADNGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQR----------------------DFGYAVFGKVVKGMDVADKISQVPTHDVGPYQNVPSKPVVILSATVLP----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VAI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -52624 for 1280 contacts (-41.1/contact) +
2D Compatibility (PS) -16936 + (NN) -5620 + (LL) 5916
1D Compatibility (HY) -10800 + (ID) 3200
Total energy: -83264.0 ( -65.05 by residue)
QMean score : 0.508
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