Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MILREFCAENLTDLTRLDKAIISRVELCDNLAAGGTTPS--YGVIKEANQYLHEKGISVAVMIRPRGGNFVYNDLELRIMEEDILRAVELESDALVLGILTSNNHIDTEAIEQLLPATQGLPLVFHMAFDVIPKSDQKKAIDQLVALGFTRILLHGSSNGEP--IIENIKHIKALVEYANNRIEIMVGGGVTAENYQYICQETGVRQAHGTRITQ
1XI3 Chain:A ((29-190))
----------VESVREALEGGATAIQMRIKN----APTREMYEIGKTLRQLT--REYDALFFVDDR-----------------VDVALAVDADGVQLGPEDMP----IEVAKEI-APNLIIGASVY---------SLEEALE-AEKKGADYLGAGSVF--PTDARVIGLEGLRKIVESV--KIPVVAIGGINKDNAREVLK-TGVDGIAVISAVM
General information:
TITO was launched using:
RESULT:
Template:
1XI3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101341 for 1201 contacts (-84.4/contact) +
2D Compatibility (PS) -16282 + (NN) -4611 + (LL) 2956
1D Compatibility (HY) -2800 + (ID) 1000
Total energy: -123078.0 ( -102.48 by residue)
QMean score : 0.479
(partial model without unconserved sides chains):
PDB file :
Tito_1XI3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XI3-query.scw
PDB file :
Tito_Scwrl_1XI3.pdb
: