Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MTEKDLLQLVVKAADEKRAEDIVILDLQPVTSVADYFVIMSASNSRQLEAIADNIREQVKGNGGDASHLEGDSKAGWVLLDLNSVV---VHIFSEDERQHYNLEKLWHEAPLLDAEDFMTE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 2J37 Chain:W ((8-488)) | RKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAIDLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGNVIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPD--------------NIVYVMDASIGQACEAQAKAFKDKVDVASVIVTKLDGHAK-GGGALSAVAATKSPIIFIGTGEHID-DFEP-FKTQPFISKLLGMGDIEGLIDKVNELKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDPRVLHHMGGMAGLQSMMRQFQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2J37.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14076 for 649 contacts (-21.7/contact) +
2D Compatibility (PS) -10663 + (NN) -3499 + (LL) 1744
1D Compatibility (HY) -4800 + (ID) 950
Total energy: -32244.0 ( -49.68 by residue)
QMean score : 0.348
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