Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------MTYKDYTGLDRTELLSKVRHMMSD---KRFNHVLGVERAAIELAERYGYD-KEKAGLAALLHDYAKELSDDEFLRLIDKYQLDPDLKKWGNNIWHGLVGIYKIQEDLAIKDQDILAAIAKHTVGSAQMSTLDKIV------YVADYIEHNRDFPGVEEARELAKVDLNKAVA-YETARTVSFLASKAQPIYPKTIETYNAYIPYLD---------------------------------------------------------------------------------------------------------------------------------------------------- |
| 2HEK Chain:A ((1-369)) | MIKEFSDPLYGFVRVGEAGLRLIDSFPFQRLRYVKQLGLAYLVFPSAQHTRFEHSLGVYHITERICESLKVKEKELVKLAGLLHDLGHPPFSHTTEVLLPRERSHED---FTERVIKETEIYEILKQDYSHEDIERLVRITLGKPEDEEEKLLSEIITGEFGSDRMDYLRRDAYFCGVSYGF----FDYDRLISTLRVYENKVVVDESGLRALENFLISRYFMYVQVYFHKVVRILSIHLVEFLKKLISQEDFTDINNFLRLNDAFVISELFKRKAFREDFERIFQRKHFKTLLSTENYEKFSETKERLLEKFPQEKVRFDEVEKEVYGGNIYVLSSEGLKKAHELSPLIASLKPIKLYRIYVDRQLWEKARSELK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HEK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -47452 for 1356 contacts (-35.0/contact) +
2D Compatibility (PS) -19397 + (NN) -1357 + (LL) 792
1D Compatibility (HY) -8400 + (ID) 1550
Total energy: -77364.0 ( -57.05 by residue)
QMean score : 0.325
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