Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLHFENDYNK-GAHPELLNALIETNDQGLSGYGTDSYCQQAADKIREVCSCPQAEVEFLVGGTQTNQVVISSMLASYEGVIAAETGHVSSHEAGAIEFSGHKVLTLPS-HNGKLLASEVATYIETFYADGNYQHMVFPGMVYISHP-TEYGTLYSKAELEELSKICKHYQIPLFIDGARLGYGLAAKDTDVDFPTIAALSDVFYIGGTKMG--ALAGEAVVFTK-KNRPKQFTTIVKQHGALLAKGRLLGLAFDRFFTDD-LYLKIGKHAIDLAEELKIILE-EKGYSFYLKSPTNQQFVIVE----NTKLTDLAK-NVAYSFWEKYD-DHHTVIRLATSWSTSREDVTALRNVL |
| 3FTB Chain:A ((29-354)) | -LDYSSNINPLGIPKSFLNNIDEGIKN--LGVYPDVNYRRLNKSIENYLKLKDIGIVLGNGASEIIELSISLF----EKILIIVPSYAEY--EINAKKHGVSVVFSYLDENMCIDYEDIISKI-D-----------DVDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGDPS-SSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAAKIKA----KQNPWNINCFAEMAAINCLKDTNYIEESLLWIKKERKRFIEELNKIGFIKRVFSPHANFVLCRLENISGEKLYDSLLKEDIVIRRCCNFIGLDDSFVRFAIKD---EKKNTKFLRAL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FTB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140654 for 2537 contacts (-55.4/contact) +
2D Compatibility (PS) -33983 + (NN) -13530 + (LL) 2044
1D Compatibility (HY) -12800 + (ID) 2100
Total energy: -201023.0 ( -79.24 by residue)
QMean score : 0.521
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