Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTFAKRLRELRQLNNITQIEMANKLGLNRVTYTNYEREKSEPSISTLKEIATIFNVSIDYLIDFEDDTKGKNNRKKLLLSLEAELKKINRSFELEIKSLLIDLLNLIKTNQLSSCDVTKWLIDINEKDLECSSEILRFISEMPKEFEPIIDIIEIYQALNKNDE
1R69 Chain:A ((1-63))
-SISSRVKSKRIQLGLNQAELAQKVGTTQQSIEQLENGKT-KRPRFLPELASALGVSVDWLLNGT---------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1R69.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34873 for 435 contacts (-80.2/contact) +
2D Compatibility (PS) -6901 + (NN) -2936 + (LL) 8012
1D Compatibility (HY) -2800 + (ID) 800
Total energy: -40298.0 ( -92.64 by residue)
QMean score : 0.667
(partial model without unconserved sides chains):
PDB file :
Tito_1R69.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1R69-query.scw
PDB file :
Tito_Scwrl_1R69.pdb
: