Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MENILDLWNQALAQIEKKLSKPSFETWMKSTKAHSLQGDTLTITAPNEFARDWLESRYLHLIADTIYELTGEELSIKFVIPQNQDVEDFMPKPQVKKAVKEDTSDFPQNMLNPKYTFDTFVIGSGNRFAHAASLAVAEAP-------AKAYNPLFIYGGVGLGKTHLMHAIGHYVIDHNPSAKVVYLSSEKFTNEFINSIRDNKAVDFRNRY-RNVDVLLIDDIQFLAGKE---QTQEEFFHTFNTLHEESKQIVISSDRPPKEIPTLEDRLRSRFEWGLITDITPPDLETRIAILRKKAKAEGLDIPNEVMLYIANQIDS-NIRELEGALIRVVAYSSLIN-KDINADLAAEALKDIIPSSKPKVITIKEIQRVVGQQFNIKLEDFKAKK--RTKSV-AFPRQIAMYLSREMT-----DSSLPKIGEEFGGRDHTTVIHAHEKISKLLADDEQLQQHVKEIKEQLK |
| 4WW0 Chain:A ((10-372)) | -------------------------------------------------------------------------------------------------------------EEKPKVTFKDVAGIEEVKEEVKEIIEYLKDPVKFQKLGGRPPKGVLLYGEPGVGKTLLAKAIAGEAH-----VPFISVSGSDFVEMFVGVGAARVRDLFETAKKHAPCMIFIDEIDAVGR--EREQTLNQLLVEMDGFDTSDGIIVIAATNRPDI---LDPALLRPGRFDRQIFIPKPDVRGRYEILKVHARNKKL-AKDVDLEFVARATPGLTGADLENLLNEAALLAARKGKEEITMEEIEEALDRITM-----TISPKEKEKIAIHEAGHALMGLVSDDDDKVHKISIIP------------HIYDKKDLYNKILVLLGGRAAEEVFFGKDGITTGAEND--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WW0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77230 for 2259 contacts (-34.2/contact) +
2D Compatibility (PS) -30839 + (NN) -8564 + (LL) 11028
1D Compatibility (HY) -8800 + (ID) 2950
Total energy: -117355.0 ( -51.95 by residue)
QMean score : 0.358
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