Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVKQGDTLSAIASQYRTTTNDITETNEIPNPDSLVVGQTIVIPIAGQFYDVKRGDTLTSIARQFNTTAAELARVNRIQLNTVLQIGFRLYIPPAPKRDIESNAYLEPRGNQVSENLQQAAREASPYLTYLGAFSFQAQRNGTL--------------------------V-APP---------------------LTNLRSI-TESQNTTLMMIITNLENQAFSDELGRILLNDETVKRRLLNEIVENARRYG-FRDIHFDFEYLRP----------QDREAYNQFLREARDLFHRE------GLEISTALAPKTSATQQGRWYEAHDYRAHGEIVDFVVLMTYEWGYSGG--PPQAVSPIG----------PVRDVIEYAL-TEMPANKIVMGQNLYGYDWTLPYTAGG---------------TPARAVSPQQAIVIADQNNASIQYDQTAQAPFFRYTDAENRRHEVWFEDARSIQAKFNLIKELNLRGISYWKLGLSFPQNWLLLSDQFNVVKKTFR |
| 1EDQ Chain:A ((155-557)) | -----------------------------------------------------------------------------------------------NSGKVVGSYFVEWGVY-GRN-FTVDKIPAQNLTHLLYGFIPICGGNGINDSLKEIEGSFQALQRSCQGREDFKVSIHDPFAALQKAQKGVTAWDDPYKGNFGQLMALKQAHPDLKILPSIGGWTL----SDPFFF-MGDKVKRDRFVGSVKEFLQTWKFFDGVDIDWEFPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSVETGRKYELTSAISAGKD------KIDKVAYNVAQNSMDHIFLMSYDFYGAFDLKNLGHQTALNAPAWKPDTAYTTVNGVNALLAQGVKPGKIVVGTAMYGRGWTGVNGYQNNIPFTGTATGPVKGTWENGIVDYRQIAGQFMSGEWQYTYDATAEAPYVFKPS---TGDLITFDDARSVQAKGKYVLDKQLGGLFSWEIDADNGDILNSMNASLG------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EDQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -124786 for 2597 contacts (-48.1/contact) +
2D Compatibility (PS) -33234 + (NN) -14285 + (LL) 8720
1D Compatibility (HY) -13600 + (ID) 2800
Total energy: -179985.0 ( -69.30 by residue)
QMean score : 0.450
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