Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRILEKAPAKINLSLDVTRKRPDGYHEVEMIMTTID---LADRIELTELAEDEVRVSSHN---RFVPD-DQRNLAYQAAKLIKDRYNVKKGVSIMITKVIPVAAGLAGGSSDAAATLRGLNRLWNLNLSAETLAELGAEIGS---------DVSFCVYGGTA-LATGRGEKIKHISTPPHCWVILAKPTIGVSTAEVYRALKLDGIEHP------DVQGMIEAIEEKSFQKMCSRLGNVLE-SVT-LDMHPEVAMIKNQMKRFGADAVLMSGSGPTVFGLVQYESKVQRIYNGLRGFCDQVYAVRMIGEQNALD |
| 4RPF Chain:A ((1-288)) | SMVKIYAPASIGNVSVGFD--V-----LGAAVSPIDGTLLGDCVSVTAAER--FSLHNEGRFVSKLPDDPKQNIVYQCWERFCQEMGKEIPVAMVLEKNMPIGSGLGSSACSVVAGLMAMNEFCGQPLDKVTLLGMMGELEGRVSGSIHFDNVAPCYLGGMQLILEQEGYISQDVPGFSDWLWVMAYPGIKVSTAEARAILPAQYRRQDCITHGRNLAGFIHACHTQQPDLAA-KMMKDVIAEPYRTQLLPGFAAARQAAQDIGALACGISGSGPTLFAVCNDQATAQRMAGWLQNHY---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RPF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131620 for 2139 contacts (-61.5/contact) +
2D Compatibility (PS) -28468 + (NN) -8974 + (LL) 1548
1D Compatibility (HY) -11600 + (ID) 2900
Total energy: -182014.0 ( -85.09 by residue)
QMean score : 0.483
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