Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMKHDIEKVLISEEEIQKKVKELGAELTSEYQDTFP------LAIGVLKGALPFMADLIKHIDTYLEMDFMDVSSYGNSTVSSGEVKIIKDLDTSVEGRDILIIEDIIDSGLTLSYLVELFRYRKAKSIKIVTLLDKPSGRKADIKADFVGFEVPDAFVVGYGLDYAERYRNLPYIGVLKPAVYES
4RHY Chain:D ((21-201))
----DIKSVLLTAEQIQARIAELGEQIGNDYR---ATTGQDLLLITVLKGAVLFVTDLARAIPVPTQFEFMAVSSYGS----SGVVRILKDLDRDIHGRDVLIVEDVVDSGLTLSWLSRNLTSRNPRSLRVCTLLRKPDAVHANVEIAYVGFDIPNDFVVGYGLDYDERYRDLSYIGTLDPRVYQ-
General information:
TITO was launched using:
RESULT:
Template:
4RHY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -145884 for 1304 contacts (-111.9/contact) +
2D Compatibility (PS) -18127 + (NN) -6734 + (LL) 792
1D Compatibility (HY) -22000 + (ID) 4250
Total energy: -196203.0 ( -150.46 by residue)
QMean score : 0.601
(partial model without unconserved sides chains):
PDB file :
Tito_4RHY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RHY-query.scw
PDB file :
Tito_Scwrl_4RHY.pdb
: