Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MDYLVKAL-AYDGKVRAYAARTTDM-VNEGQRRHGTWPTASAALGRTMTASLMLGAMLKGDDKLTVKIEGGGPIGA------IVADANAKGEVRAYVSNPQVHFDLNEQGKLDVRR-----AVGTNGTLSVVKDLGLREFFTGQ--VEIVSGELGDDFTYYLVSSEQVPSSVGVGVLVNPDNTILAAGGFIIQLMPGTDDETITKIEQRLSQVEPISK----LIQKGLTPEEILEEVLGEKPEILETMPVRFHCPCS-KERFETAILGLGKKEIQDMIEEDGQAEAVCHFCNEKYLFTKEELEGLRDQTTR |
| 3P4G Chain:A ((23-323)) | HSFDHYIGSAFDASNNNVAVTGNVSATLNVLAGDDKVSIDGNVEDVLVAANVAVLDMG---TGNDQLYVAGDVLGKIDAGTGNDEIYIKGDVSAAVDAGTGNDEVYIGGNLSGDLDAGTDNDNIQIGGDVNAALNAGTGNDNLIIGHDVSGIVNMGTDND----TVEVGRTINASGKVLLDTGDDSLLVSGDLFGEVDGGTGNDTIIIAGKVSGNIQGGTGNDIVRVQSQVWAEANIS--LGTGDDVLIVEH-ELHGTVAGNEGDDSIYL---KFYTKEQYNNNSDLRNRVANFEHIRVSDGVVKGSPADFADY |
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General information:
TITO was launched using:
| RESULT:
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Template: 3P4G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2062 for 2399 contacts (0.9/contact) +
2D Compatibility (PS) -29018 + (NN) 851 + (LL) 1216
1D Compatibility (HY) -2800 + (ID) 2600
Total energy: -30289.0 ( -12.63 by residue)
QMean score : 0.165
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