Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSRTIWTIILGALLVCCIAVAYTLTKSQAGASSSGESIATIGGKSVTREEWLKEMEDQYGKSTLEDMINVRVVEQLAKKNKLKISKSEVDREFLLIKAV---------NNSFYEDEHTTEKEWKDQIRYNILLEDLLTR---DIDISNKELESFYNKNKELYQFDDSYRIRHIVVK----------DEEEAREVLKELKGGSSFEAVAAERSTDRYTSPYGGDLGFVTEAS-DNIPSAYIEEAKTLKEDEWSQEPIKVSNGYAIIQLKEKLKARTFSFDEVKDQIRRQIAMDQLGDKAT--VKTLWKEADVSWFYGEKSTK------------ |
| 3NRK Chain:A ((50-361)) | -LNRVIATVG-----------TVSISELDLDDATEKYNRLQKHLKH-------EDYRKSFRTRIIDFLIDRAIVDVVAEEESIQVNEQRVDSEIEKRMEVMGITNRKQFEKTMETSSGMPFELWVTELPYQIKKGQLLQLKIAVPPPNEQEIRSWYNQNKDKVGFEIRYRIISIAPENDSIQEENRLYKEVSEIRKSILADPSSFALIAGSPRNDPALRARRGMVEWISSFDLYKYSKITATIAAPLPNGGVS-EVFRDERKRYCILKIEGKRPT--PMENLRGGIQNILYRDKEEDTFHRWLKESRAEIPIQIFDEAYRKENKIPLKEETFHL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NRK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5714 for 1856 contacts (3.1/contact) +
2D Compatibility (PS) -29306 + (NN) -5286 + (LL) 2740
1D Compatibility (HY) -8400 + (ID) 2350
Total energy: -36888.0 ( -19.88 by residue)
QMean score : 0.352
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