Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLEFDTIKDSKQLNGLALAYIGDAIFEVYVRHHLLKQGFTKPNDLHKKSSRIVSAKSQAEILFFLQNQSFFTEEEEAVLKRGRNAKSGTTPKNTDVQTYRYSTAFEALLGYLFLEKKEERLSQLVAEAIQFGTSGRKTNESAT
1U61 Chain:A ((2-128))
-------IDAKQLNSLALAYMGDAVYEQYIRYHLLQKGKVRPNQLHRLGTSFVSAKAQAKVVYHLLETAFLTEEEEAVLRRGRNANSGTVPKNTDVQTYRHSTAFEALIGYHHLLNNRERLDEIVYKAIAVLEE---------
General information:
TITO was launched using:
RESULT:
Template:
1U61.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5004 for 918 contacts (-5.5/contact) +
2D Compatibility (PS) -13805 + (NN) -9419 + (LL) 956
1D Compatibility (HY) -1600 + (ID) 1000
Total energy: -29872.0 ( -32.54 by residue)
QMean score : 0.302
(partial model without unconserved sides chains):
PDB file :
Tito_1U61.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1U61-query.scw
PDB file :
Tito_Scwrl_1U61.pdb
: