Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQAKAVARTVRIAPRKARLVMDLIRGKQVGEAVSILNLTPRAASPIIEKVLKSAIANAEHNYEMDANNLVISQAFVDEGPTLKRFRPRAMGRASQINKRTSHITIVVSEKKEG
1I4J Chain:A ((1-112))
MEAKAIARYVRISPRKVRLVVDLIRGKSLEEARNILRYTNKRGAYFVAKVLESAAANAVNNHDALEDRLYVKAAYVDEGPA---VLPRARGRADIIKKRTSHITVILGEKHG-
General information:
TITO was launched using:
RESULT:
Template:
1I4J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62113 for 793 contacts (-78.3/contact) +
2D Compatibility (PS) -11126 + (NN) -1588 + (LL) 168
1D Compatibility (HY) -9200 + (ID) 2900
Total energy: -86759.0 ( -109.41 by residue)
QMean score : 0.601
(partial model without unconserved sides chains):
PDB file :
Tito_1I4J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1I4J-query.scw
PDB file :
Tito_Scwrl_1I4J.pdb
: