Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTKTLFIFSAILTLSIFAPNETFAQTAGNLIEPKIINAETAQFSTKKLRKVDQMIERDIAAG-FPGAVLVVV-KDGRIIKKAAYGYSKKYEGSELLRRPAKMKTRTMFDLASNTKMYATNFALQRLVSQGKLDVYEKVSAYLPGFKDQ----------PGDLIKGKDKIRVIDVLQHQSGLPSSFY--FYTPEKAGKYYSQERDKTIEYLTKIPLDYQTGTKHVYSDIGYMLLGCIVEKLTGKPLDVYTEQELYKPLRLKHTLYNPLQKGFKPKQFAATERMGNTRDGVIQFPNIRTNTLQGEVHDEKAFYSMDGVSGHAGLFSNADDMAILLQVMLNKGSYRNISLFDQKTADLFTAPSATDPTFALGWRRNGSKSME-----------WMFGPH-------------ASENAYGHTGWTGTVTIIDPAYNLGIALLTNKKHTPVIDPEENPNVFEGDQFPTGSYGSVITAIYEAME-- |
3HLF Chain:A ((8-432)) | -----------------------HHSSGLVPRGSHMGSIIDAAAAAGPVVLMETAFRKAVESRQIPGAVIMARDASGNLNYTRCFGARTVRRDENNQLPP--LQVDTPCRLAAATKLLTT-IMVLQCMERGLVDLDETVDRLLPDLSAMPVLEGFDDAGNARLRERRGKITLRHLLTHTSGLSYVFLHPLLREYMAQGYLQSAEKFGIQSRLAPPAVNDPGAEWIYG-TNLDWAGKLVERATGLDLEQYLQENICAPLGITDMTFKLQQRPDMLARRADQTHRNSADGRLRYDD------------SVYFRADGEECFGGQGVFSSPGSYMKVLHSLLKRDG----LLLQPQTVDLMFQPALEPRLEEQMNQHMDASPHINYGGPMPMVLRRSFGLGGIIALEDLDGENWRRKGSLTFGGGPNIVWQIDPKAGLCTLAFFQLEPW-------------NDPVCRDLTRTFEHAIYAQYQQG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HLF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -123667 for 3127 contacts (-39.5/contact) +
2D Compatibility (PS) -40438 + (NN) -8236 + (LL) 3652
1D Compatibility (HY) -9200 + (ID) 3450
Total energy: -181339.0 ( -57.99 by residue)
QMean score : 0.393
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