Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSNTWKIYILAIVSFLVGTSEYIISGILDQIAHTLGITLAAAGQLITIFSLVYALSTPVLMALTASMDRRKLMMYALGLFVFGNVLAFVLP----GYGWFIAARIIMAMGAGVVVVTALTIAAKIASEGKQGSAIATVVMGFTASLIIGVPLGRMIAV-ALGWKSVFGAIALLGLIAMVVIFFTLPYTEGD------KP-V--PLLQQ-----LALFKKRKVAMGLSITFFWLGGYSVAYTYLSPYLLNISGINGKLLSGVLLIFGIASLVGSKFGGYSTDKWGVPFTLVGGMT---LHIVTLILLSLVT-HSYIGVLVILILWSFAAWSTGPTQQFHLATIEPE-MSGVLLSMNQSMMQFAM-AVGAGIGGVFVENVSLASITWVGALGVMIAIIASLLIFNSQPKQALKDINQ
1PW4 Chain:A ((34-447))---------IFFGYAAYYLVRKNFALAMPYL-VEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKND---TAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQ-


General information:
TITO was launched using:
RESULT:

Template: 1PW4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -402617 for 3217 contacts (-125.2/contact) +
2D Compatibility (PS) -37569 + (NN) 1306 + (LL) 1348
1D Compatibility (HY) -15200 + (ID) 2100
Total energy: -454832.0 ( -141.38 by residue)
QMean score : 0.275

(partial model without unconserved sides chains):
PDB file : Tito_1PW4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1PW4-query.scw
PDB file : Tito_Scwrl_1PW4.pdb: