Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSYDRVKDFDLPELAVHLQPHGAVMIDRKSMFYFRLSGRGAQLAFLLSKNKNLHKTARIWEIMKKEEMSADQLKEELSAHPFTEAWTEGLLDQPLHVSGSLDSYLPISCTLQLTNACNLSCSFCYASSGK-------PYPEELSSEQWILVMQKLAAHGVADITLTGGEAKLIKGFKELVVVASSL--FTNVNVFSNGLNWRDEEVELLSHLGNVSVQISIDGM-DNTHDQLRGRKGGFKESMNTIKKLSEANIPVIVAMTI-NESNADEVSDVVEQCANAGAFIFRAGKTLSVGRATE-------GFKALDIDFEEMVQIQLREARHKWGD-RLNIIDWEHEESSFTTDFCTPGYLA---WYIRADGYVTPCQLEDLPLGHILEDSMADIGSPARLLQLKCEAKNCKCIGKIELSEPDLPFQKEVKAGIQE |
| 1TV8 Chain:A ((3-329)) | ---------------------------------------------------------------------------------------EQIKDKL----GRPIRDLRLS----VTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEPLMRRDLDVLIAKLNQIDGIEDIGLTTNGLL-LKKHGQKLYDAGLRRINVSLDAIDDTLFQSINNRNIKATTILEQIDYATSIGLNVKVNVVIQKGINDDQIIPMLEYFKDKH-IEIRFIEFMDVGNDNGWDFSKVVTKDEMLTMIEQHFEIDPVEPKYFGEVAKYYRHKDNGVQFGLITSVSQSFCSTCTRARLSSDGKFYGCLFATVD-GFNVKAFIRSGVTDEELKEQFKALWQIR-------DDRYSDERTAQTVANRQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TV8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67573 for 2336 contacts (-28.9/contact) +
2D Compatibility (PS) -33580 + (NN) -20340 + (LL) 8984
1D Compatibility (HY) -9200 + (ID) 2500
Total energy: -124209.0 ( -53.17 by residue)
QMean score : 0.366
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