Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKGYRILIVEDDVMIGDLLQKILQREGYRVIWKTDGADVL------SVIQKVDLVIMDVMLPGEDGYQMSAKIKKLGLGIPVIFLSARNDMDSKLQGLQIG-EDYMVKPFDPRELLLRMRNMLEHHYGTFTQIKHLYIDAVTKKVFNESLHDEVLFTAIERKIFFYLYENRDSILTKEHFFEYLWQLEDRNPNIVNVHIKKIRAKINDQAGEMIENIYGEGYRLNTVVKK
1ZH2 Chain:B ((4-119))
-----VLIVEDEQAIRRFLRTALEGDGMRVFE----AETLQRGLLEAATRKPDLIILDLGLPDGDGIEFIRDLRQWS-AVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRH--------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1ZH2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82812 for 793 contacts (-104.4/contact) +
2D Compatibility (PS) -12335 + (NN) -9708 + (LL) 8964
1D Compatibility (HY) -8000 + (ID) 2150
Total energy: -106041.0 ( -133.72 by residue)
QMean score : 0.625
(partial model without unconserved sides chains):
PDB file :
Tito_1ZH2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZH2-query.scw
PDB file :
Tito_Scwrl_1ZH2.pdb
: