Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIHLSILDQAPVSK-G--------ESPVTTLQHSVELAQLSEQWGYKRYWFAEHHSTK------GLASTAPEIMIARIAAQTNTIRVGSGGVLLPQYSPFKVAETFRQLEALYPNRIDLGVGRSPGGTTKTRLALTD----GVKKSLTEFNRQLQDVSYFLTDS---------------------L-PPDHPYA---GIKAAPLI-GTAPELWVLGLGENSARRAAHQGIGYVFGHFINPER-GENAFRIYRESFRPSAHF-SNPSALFTIFVICAKTDEEAEELALSQDLWL-------LRVGKGLDSRVPSIEEAKAHPY-----TASDKKLIEE-N-RKRMVIGSPTTVKQQLLDLTGCYETNEIMVLCNVFDFEAKKESYERLAELFL
1TVL Chain:A ((7-404))-IQFGAMIHGVGGTTDGWRHPDVDPSASTNIEFYMKKAQTAEKGLFSFIFIADGLFISEKSIPHFLNRFEPITILSALASVTKNIGLVGTF-STSFTEPFTISRQLMSLDHISGGRAGWNLVTSPQE--GAARNHSKSNLPEHTERYEIAQEHLDVVRGLWNSWEHDAFIHNKKTGQFFDQAKLHRLNHKGKYFQVEGPLNIGRSKQGEPVVFQAGSSETGRQFAAKNADAIFTHS-NSLEETK-AFYADVKSRAADEGRDPSSVRIFPGISPIVADTEEEAEKKYREFAELIPIENAVT----------------------EAKARNLTLREVAQEMAFPRTLFIGTPERVASLIETWFNAEAADGFIVGSD------IPGTLDAFVEKVI


General information:
TITO was launched using:
RESULT:

Template: 1TVL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1517 -133306 -87.87 -448.84
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -87.87
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.411

(partial model without unconserved sides chains):
PDB file : Tito_1TVL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1TVL-query.scw
PDB file : Tito_Scwrl_1TVL.pdb: