Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKVFLIGANGQIGQRLVSLFQDNPD-HSIRAMVRKEEQKASLEAAGAEAVLANLEGSPEEIAAAAKGCDAIIFTAGSGGSTG----------Y-------DKTLLVDLDGAAKAIEAAAIAGIKRFIMVSALQAHNREN-WNE-ALKPYYVAKHYADKILEASGLTYTIIRPGGLRNEPGTG-TVSAAKD-----LERGFISRDDVAKTVIASLDEKNTENRAFDLTEGD----TPIAEALKKL
1XQ6 Chain:A ((5-246))PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-GGEADVFIGDIT-DADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALF


General information:
TITO was launched using:
RESULT:

Template: 1XQ6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1211 -91239 -75.34 -430.37
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -75.34
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.469

(partial model without unconserved sides chains):
PDB file : Tito_1XQ6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1XQ6-query.scw
PDB file : Tito_Scwrl_1XQ6.pdb: