Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKVERLLINYKTLEEFKKFKEYGIQELSMLEELQDNIIENDSTSPFYGIYFGDKLVARMSLYQVNGKSN------PYFDNRQDYLELWKLEVLPGYQNRGYGRALVEFAKSFK----MPIRTNPRMK-SAEFWNKMNFKTVKYDMARDKGENPLIWHPDMDREMTPGESA
2PC1 Chain:A ((71-173))--------------------------------------------GYAWVGIEDGMLATYAAVIDGHEEVYDAIYEGKWLHDNHRYLTFHRIAISNQFRGRGLAQTFLQGLIEGHKGPDFRCDTHEKNVTMQHILNKLGYQYCGKVPL------------------------


General information:
TITO was launched using:
RESULT:

Template: 2PC1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 317 -58485 -184.49 -635.70
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -184.49
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.436

(partial model without unconserved sides chains):
PDB file : Tito_2PC1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PC1-query.scw
PDB file : Tito_Scwrl_2PC1.pdb: