Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMWRNASMNHSKRNDANDFDSMDEWLRQFFEDPFAWYDETLPIDLYETSQQYIIEADLTFLQPTQVTVTLSGCEFILTVKSS---------GQTFEKQMMLPFYFNDKNIQVECE-NQILTVAVNKETEDGSSFSLQFPLS
4MJH Chain:A ((2-87))----------------------------------------VSEIRHTADRWRVSLDVNHFAPDELTVKTKDGVVEITGKHEERQDEHGYISRCFTRKYTLPPGVDPTQVSSSLSPEGTLTVEAPMP--------------


General information:
TITO was launched using:
RESULT:

Template: 4MJH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 218 -19587 -89.85 -257.72
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -89.85
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.545

(partial model without unconserved sides chains):
PDB file : Tito_4MJH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MJH-query.scw
PDB file : Tito_Scwrl_4MJH.pdb: