Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMESKVVENRLKEAKLIAVIRSKDKQEACQQIESLLDKGIRAVEVTYTTPGASDIIESFRNREDILIGAGTVISAQQAGEAAKAGAQFIVSPGFSADLAEHLSFVKTHYIPGVLTPSEIMEALTFGFTTLKLFPSGVF-GIPFMKNLAGPFPQVTFIPTGGIHPSEVPDWLRAGAGAVGVGSQLGSCSKEDLQAVFQV
2YW3 Chain:C ((10-168))---------LAESRLLPLLTVRGGEDLLGLARVLEEEGVGALEITLRTEKGLEALKALR-KSGLLLGAGTVRSPKEAEAALEAGAAFLVSPGLLEEVAALAQARGVPYLPGVLTPTEVERALALGLSALKFFPAEPFQGVRVLRAYAEVFPEVRFLPTGGIKEEHLPHY----------------------------


General information:
TITO was launched using:
RESULT:

Template: 2YW3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 748 -95169 -127.23 -602.33
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain C : 0.78

3D Compatibility (PKB) : -127.23
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.595

(partial model without unconserved sides chains):
PDB file : Tito_2YW3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YW3-query.scw
PDB file : Tito_Scwrl_2YW3.pdb: