Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLEKIIKQKKEEVKTLVLPVEQPFEKRSFKEALASPNRFIGLIAEVKKASPSKGLIKEDFVPVQIAKDYEAAKADAISVLTDTPFFQGENSYLSDVKRAVSIPVLRKDFI-DSLQVEESRRIGADAILLIGEVLDPLHLHELYLEAGEKGMDVLVEVHDASTLEQILKVFTPDILGVNNRNLKTFETSVKQTEQIASLVP---KESLLVSESGIGSLEHLTFVNEHGARAVLIGESLMRQTSQRKAIHALFRE
1VC4 Chain:A ((11-253))VLGEIARKRASEVAPYP--LPEPPSVPSFKEALL--RPGLSVIAEVKRQSPSEGLIRE-VDPVEAALAYARGGARAVSVLTEPHRFGGSLLDLKRVREAVDLPLLRKDFVVDPFMLEEARAFGASAALLIVALLGE-LTGAYLEEARRLGLEALVEVHTERELEIALE-AGAEVLGINNRDLATLHINLETAPRLGRLARKRGFGGVLVAESGYSRKEELKALEG-LFDAVLIGTSLMRAPDLEAALRELV--


General information:
TITO was launched using:
RESULT:

Template: 1VC4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1361 -26858 -19.73 -112.37
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.80

3D Compatibility (PKB) : -19.73
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.462

(partial model without unconserved sides chains):
PDB file : Tito_1VC4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VC4-query.scw
PDB file : Tito_Scwrl_1VC4.pdb: