Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDSIEKVSKNLIEEAYLTKASDIHIVPRERDAIIHFRVDHALLKKRD---MKKEECVRLISHFKFLSAMDIGERRKPQNGSLTLKLKE-GNVHLRMSTLPTINEESLVIRVMPQYNIPSIDKLSLFPKTGATLLSFLKHSHGMLIFTGPTGSGKTTTLYSLVQYAKKHFNRNIVTLEDPVETRDED----VLQVQVNEKAGVTYSAGLKAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLTSLHTRDAKGAIYRLLEFGIN------MNEIEQTVIAIAAQRLVDLACPFCENGCSSVYCRQSRNTRRASVYELLYG-KNLQQCIQEAKGN---------HANYQYQTLRQIIRKGIALGYLTTNNYDRWVYHEKD
2EWV Chain:A ((12-357))----ELKILEIIKEAIELGASDIHLTA---GAPPAVRIDGYIKFLKDFPRLTPEDTQKLAYSVMSEK----HRQKLEENGQVDFSFGVRGVGRFRANVFYQRGSVAAALRSLPAEIP-EFKKLGLPDKV----LELCHRKMGLILVTGPTGSGKSTTIASMIDYINQTKSYHIITIEDPIEYVFKHKKSIVNQREVG-EDTKSFADALRAALREDPDVIFVGEMRDLETVETALRAAETGHLVFGTLHTNTAIDTIHRIVDIFPLNQQEQVRIVLSFILQGIISQRLLPKIGG-----------------GRVLAYELLIPNTAIRNL--IRENKLQQVYSLMQ-----MQTMNQTLYKLYKQGLITLEDAMEASPDPKE


General information:
TITO was launched using:
RESULT:

Template: 2EWV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1607 23901 14.87 75.87
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : 14.87
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.418

(partial model without unconserved sides chains):
PDB file : Tito_2EWV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2EWV-query.scw
PDB file : Tito_Scwrl_2EWV.pdb: