Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSTIELNKRQEHILQIVKENGPITGEHIAEKLNLTRATLRPDLAILTMSGFLEARPRVGYFYTGKTGTQLLADKLKKLQVKDFQSI-PVVIHENVSVYDAICTMFLEDVGTLFVVDRDAVLVGVLSRKDLLRASIGQQELTSVPVHIIMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTKTNMTKILVSLSENEIL
1PBJ Chain:A ((3-121))-------------------------------------------------------------------------------VEDVMVTDVDTIDITASLEDVLRNYVENAKGSSVVVK-EGVRVGIVTTWDVLEAIAEGDDLAEVKVWEVMER--DLVTISPRATIKEAAEKMVKNVVWRLLVEED----DEIIGVISATDILRAKM--------


General information:
TITO was launched using:
RESULT:

Template: 1PBJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 537 -45569 -84.86 -386.17
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -84.86
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.540

(partial model without unconserved sides chains):
PDB file : Tito_1PBJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1PBJ-query.scw
PDB file : Tito_Scwrl_1PBJ.pdb: