Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVSIRRSFEAYVDDMNIITVLIPAEQKEIMTPPFRLETEITDFPLAVREEYSLEAKYKYVCVSDHPVTFGKIHCVRASSGHKTDLQIGAVIRTAAFDDEFYYDGELGAVYTA--DHTVFKVWAPAATSAAVKLSHPNK---SGRTFQMTRLEKGVYAVTVTG-------DLHGYEYLFCICNNSEWMETVDQYAKAVTVNGE------------KGVVLRPDQMKWTA----PLKPFSHPVDAVIYETHLRDFSIHENSGM---INKGKYLALTETDTQTANGSSSGLAYVKELGVTHVELLPVNDFAGVDEEKP----------LDAYNWGYNPLHFFAPEGSYASNPHDPQTRKTELKQMINTLHQHGLRVILDVVFNHVYKRENSPFEKTVPGYFFRHDECGMPSNGTGVGNDIASERRMARKFIADCVVYWLEEYNVDGFRFDLLGILDIDTVLYMKEKATKAKPGILLFGEGWDLATP-LPH-EQKAALANAPRMPGIGFFNDMFRDAVKGNTFHLKATGFALGNGESAQAVMHGIAGSSGWKALAPI-VPEPSQSINYVESHDNHTFWDKMSFALPQE-----NDSRKRSRQRLAAAIILLAQGVPFIHSGQEFFRTKQGV----------------------------------ENSYQSSDSINQLDWDRRET------FKEDVHYIRRLISLRKAHPAFRLRSAADIQRHLECLT--------LKEHLIAYRLYDLDEVDEWKDIIVIHHASPDSVEWRLPN----DIPYRLLCDPSGFQEDP-------TEIKKTVAVNGIGTVILYLASDLKSFA
2YA0 Chain:A ((2-710))--------------------------------------------------------------------------------------------WRLKDETYSYDGKLGADLKEEGKQVDLTLWSPSADKVSVVVYDKNDPDKVVGTVALEKGERGTWKQTLDSTNKLGITDFTGYYYQYQIERQGKTVLALDPYAKSLAAWNSDDSKIDDAHKVAKAAFVDPAKLGPQDLTYGKIHNFKTREDAVIYEAHVRDFTSDPAIAKDLTKPFGTFEAFI-----------EKLDYLKDLGVTHIQLLPVLSYYFVNELKNHERLSDYASSNSNYNWGYDPQNYFSLTGMYSSDPKNPEKRIAEFKNLINEIHKRGMGAILDVVYNHTAK--VDLFEDLEPNYYHFMDADGTPRTS-FGGGRLGTTHHMTKRLLIDSIKYLVDTYKVDGFRFDMMGDHDAASIEEAYKAARALNPNLIMLGEGWRTYAGDENMPTKAADQDWMKHTDTVAVFSDDIRNNLKSGYPNEGQPAFITGGKRDVNTIFKNLIAQP-----TNFEADSPGDVIQYIAAHDNLTLFDIIAQSIKKDPSKAENYAEIHRRLRLGNLMVLTAQGTPFIHSGQEYGRTKQFRNPAYRTPVAEDKVPNKSHLLRDKDGNPFDYPYFIHDSYDSSDAVNKFDWTKATDGKAYPENVKSRDYMKGLIALRQSTDAFRLKSLQDIKDRVHLITVPGQNGVEKEDVVIGYQITAPN----GDIYAVFVNADEKAREFNLGTAFAHLRNAEVLADENQAGPVGIANPKGLEWTEKGLKLNALTATVLRVSQNGTS--


General information:
TITO was launched using:
RESULT:

Template: 2YA0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 3745 112936 30.16 187.91
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : 30.16
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.459

(partial model without unconserved sides chains):
PDB file : Tito_2YA0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YA0-query.scw
PDB file : Tito_Scwrl_2YA0.pdb: