Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKHTFVLFLSLILLVLPGCSAEKSSADTAKKTLTIYSTMSTDSERDTFRKLAAAFEKEHSDIHVSLHF-PGNDYENMMRVRMAANDLPDLFDTHG---WGKIRYGEYTADLRDMKWT----QDLDPNLNSILKNKSGKVYAYPINQAKDGLAYNRNILDRYGIA---PPETMDDFIKALRTIKEKSKG-SIVPFWFAGYDKSSFAQYYDQFATPLLITDPAHNEKKQLINGTFQW-S-KFTYLSEILKQMQKEKLINIDAVTAKKSQLIELMAQNKIAFTMQGGTLGQDVAQINP--NVKVGIIPTPAIHPGDDPIWIGGERYTLAAWKDSPQLKEAKDFIAFMARPANAKQMAEA-TSLPSGLTNVKA-DIFYANDY---EYYQDVKVEPYFD-RLYLPNGMWD-VLGTVGQELAADILAPQDISQKLGREYKRLREQSETQGAENNE
5CI5 Chain:A ((22-414))-----------------------------SKTLTIWIGGQVAELDETWNSVIKTFEEKY-GISVEVQLFGFDTYYDKLVTALQAGKGPDLAFADLGGWVPTFAEKGWLEPMEEHLKNWEGTAQIWPNLWPT-VTYKKIRYGLPWYTDCRLLLYNKAMFEKAGLNPDNPPKTWDELLDAALKIT-D-TKNRIYGYGVSGTKTEHTTLGYMMFLYA-----AGGKLLTD-DYSKAAFDSPEGLKALKFYTDLAKKYNVSPNAIQYHEDDYRNMMAQNRVAMAIGGPWSFPLIEAANPDIAGKYSVALHPYDAKP--A-SV-LGGWALVIPSSSPNKEDAWKLAEYLTSFDVWMKWVEEKGGPMPTRMDVCKKSK-LANDVKWQIIFETFPHAVARPPIPQYP--QISEQIQTMVQRVLLGELTPEEAIKIAAENVNKILGA----------


General information:
TITO was launched using:
RESULT:

Template: 5CI5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2159 28595 13.24 77.28
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : 13.24
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.448

(partial model without unconserved sides chains):
PDB file : Tito_5CI5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5CI5-query.scw
PDB file : Tito_Scwrl_5CI5.pdb: