Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKRKIGLAMSLVIAAGTILGACGNSEKSSGSGEGKNKFSVAMVTDVGGVDDKSFNQSAWEGIQAFGKENGLKKGKNG-YDYLQSKSDADYTTNLNKLARENFDLIYGVGYLMED---SISEIADQRKNTNFAIIDAVVDK------DNVASITFKEQEGSFLVGVAAALSSKS-----GKIGFVGGME--SELIKKFEVGFRAGVQAVNPKA-VVEVKYAGGFDKADVGKATAESMYKS----GVDVIYHSAGATGTGVFTEAKNLKKEDPKRDVWVIGVDKDQYAEGQVEGTDDN--VTLTSMVKKVDTVVEDVTKKASDGKFPGGETLTYGLDQDGVGISPSKQNLSDDVIKAVDKWKKKIIDGLEIPATEKELKTFKAE
4KZK Chain:A ((37-304))--------------------------------------VKIGFVV-KQP--DDPWFQDEWRFAEQAAKDK------HFTLVKIAAPSGEKVSTALDSLAAQKAQGVIICAPDVKLGPGIAAKAKR--YGMKLMSVDDQLVDGRGAPLADVPHMGISAYRIGRQVGDAIAAEAKRRGWNPAEVGVLRLAYDQLPTARERTTGAVDALKAAGFAAANVVDAPEMTA-DTEGAFNAANIAFTKHRNFRHWVAFGSNDDTTVGAVRAGEGRGIGT--DDMIAVGINGSQVALNEF--AKPKPTGFFGSILLNPRLHGYDTSVNMYD-------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4KZK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1275 21850 17.14 89.55
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : 17.14
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.435

(partial model without unconserved sides chains):
PDB file : Tito_4KZK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4KZK-query.scw
PDB file : Tito_Scwrl_4KZK.pdb: