Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGMSAISTETLSLGYGDAVIIDELNLTIPKGEITVFIGSNGCGKSTLLRSLARLMKPRGGSVLLEGRAIAKLPTKEVAKELAILPQGPSAPEGLTVHQLVKQGRYPYQNWLKQWSKEDEEAVERALKATKLEDMADRAVDSLSGGQRQRAWIAMTLAQETDIILLDEPTTYLDMTHQIEILDLLFELNEKEDRTIVMVLHDLNLACRYAHHLVAIKDKRIYAEGRPEEVITCDLVQNVFSMNCQVTQDPLFGTPLCIPHGRGRCIVQEAAFTSHG
3J15 Chain:B ((365-535))---------------------------IRKGEVIGIVGPNGIGKTTFVKMLAGVEEPTEGKV-------------EWDLTVAYKPQYIKAEYEGTVYELLSKIDSSKLN--SNFYKTE------LLKPLGIIDLYDRNVEDLSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLMEKNEKTALVVEHDV-LMIDY------VSDRLIVFEGEP-------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3J15.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 767 -94762 -123.55 -554.16
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain B : 0.68

3D Compatibility (PKB) : -123.55
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.434

(partial model without unconserved sides chains):
PDB file : Tito_3J15.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3J15-query.scw
PDB file : Tito_Scwrl_3J15.pdb: