Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGIKQYSQEELKEMALVEIAHELFEE-HKKPVPFQELLNEIASLLGVKKE-----ELGDRIAQFYTDLNIDGRFLALSD------QTWGLRSWYPYDQLDEETQPTVKAKKKKAKKAVEEDLDLDEFEEIDEDDLDLDEVEEELDLEADDFDEEDLDEDDDDLEIEEDIIDEDDEDYDDEEEEIK
2MBF Chain:A ((346-427))------------AESYSDLIAKALKSTFDGRMRLNEIYNWFASNVPYFGNRTSQEQSAGWKNSIRHNLSLHSRFMRIQNEGAGKSSWWVINPDA-------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2MBF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 172 -7554 -43.92 -107.91
target 2D structure prediction score : 0.76
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -43.92
2D Compatibility (Sec. Struct. Predict.) : 0.76
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.562

(partial model without unconserved sides chains):
PDB file : Tito_2MBF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2MBF-query.scw
PDB file : Tito_Scwrl_2MBF.pdb: