Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMREELKGIFASVFGEKEGLRFFFAPGRVNLIGEHTDYNGGH-VFPCALTMGTYAAVAERNDGLVRMYSDNFRNAGIKECSLDDIRYQKEDDWANYPKGVIYEFQQRG---YAVPHGFDIVFSGNIPN---GAGLSSSASIELLMGVVLQSYFHPEVDALELVKMAQHAENHFIGVNCGIMDQFAIGMGKKHHAMLLNCDTLD-Y------EYSK---------------LNVSGLALVIANTNKKRTLADSSYNTRRQECNDALLDLKKGLDIAALGDIKPSDFDAHSSLIQNETNRRRAKHAVYENHRAIKTAHMFKENNIDEIGQLMKESHLSLKDDYE-VTCPELDELVFAAWDHEGVIGSRMTGAGFGGCTISIVKDE-FVDDFIQKVGDRYQEKTGLRADFYVADIGEGARELKGE
3GON Chain:A ((2-317))-------------------IAVKTCGKLYWAGEYAILEPGQLALIKDIPIYMRAEIAFSDSYRIY--SDMFDFA----VD------LRPNPDYSLIQETIALMGDFLAVRGQNLRPFSLAIYGKMEREGKKFGLGSSGSVVVLVVKALLALYNLSVDQNLLFKLTSAVLLK-RGDNGSMGDLACIAAEDL---VLYQSFDRQKVAAWLEEENLATVLERDWGFSISQVKPT-LECDFLVGWTKEVAVSSH------------MVQQIKQNIN---------QN---F---------LTSSKE------TVVSLVEALEQGKSEKIIEQVEVASKLLEGLSTDIYTPLLRQLKEASQD-LQA-VAKSSGAGGGDCGIALSFDAQSTKTLKNRWA----------------------------


General information:
TITO was launched using:
RESULT:

Template: 3GON.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1420 -25254 -17.78 -88.61
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -17.78
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.469

(partial model without unconserved sides chains):
PDB file : Tito_3GON.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GON-query.scw
PDB file : Tito_Scwrl_3GON.pdb: