Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------------------MTDRIHVQPAHLRQAAAHHQQTADYLRTVPSSHDAIRESLDSLGPIFSELRDTGRELLELRKQCYQQQADNHADIAQNLR------------TSAAMWEQHERAASRSLGNIIDGSR-------
1K04 Chain:A ((18-159))
EISPPPTANLDRSNDKVYENVTGLVKAVIEMSSKIQPAPPEEYVPMVKEVGLALRTLLATVDETIPLLPASTHREIEMAQKLLNSDLGELINKMKLAQQYVMTSLQQEYKKQMLTAAHALAVDAKNLLDVIDQARLKMLGQT
General information:
TITO was launched using:
RESULT:
Template:
1K04.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11882 for 598 contacts (-19.9/contact) +
2D Compatibility (PS) -11372 + (NN) -2508 + (LL) 0
1D Compatibility (HY) -2800 + (ID) 600
Total energy: -29162.0 ( -48.77 by residue)
QMean score : 0.444
(partial model without unconserved sides chains):
PDB file :
Tito_1K04.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1K04-query.scw
PDB file :
Tito_Scwrl_1K04.pdb
: