Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVSGSDSRSEPSQLSDRDLVESVLRDLSEAADKWEALVTQAETVTYSVDLGDVRAVANSDGRLLELTLHPGVMTGYAHGELADRVNLAITALRDEVEAENRARYGGRLQ
1FAF Chain:A ((37-78))
---------------------------------------------------------------QSLLLHPDK-GG--SHALMQELNSLWGTFKTEVYNLRMNLGGTGF-
General information:
TITO was launched using:
RESULT:
Template:
1FAF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7813 for 184 contacts (-42.5/contact) +
2D Compatibility (PS) -4642 + (NN) -1174 + (LL) 4508
1D Compatibility (HY) -1600 + (ID) 500
Total energy: -11221.0 ( -60.98 by residue)
QMean score : 0.325
(partial model without unconserved sides chains):
PDB file :
Tito_1FAF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FAF-query.scw
PDB file :
Tito_Scwrl_1FAF.pdb
: