Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEHQSLPAPEASTEVRVAIVGVGNCASSLVQGVEYYYNADDTSTVPGLMHVRFGPYHVRDVKFVAAFDVDAKKVGFDLSDAIFASENNTIKIADVAPTNVIVQRGPTLDGIGKYYADTIELSDAEPVDVVQALKEAKVDVLVSYLPVGSEEADKFYAQCAIDAGVAFVNAL-PVFI--ASDPVWAKKFTDARVP-IVGDDIKSQVGATITHRVLAKLFEDRGVQLDRTMQLNVGGNMDFLNMLERERLESKKISKTQAVTSNLKREFKTKDVHIGPSDHVGWLDDRKWAYVRLEGRAFGDVPLNLEYKLEVWDSPNSAGVIIDAVRAAKIAKDRGIGGPVIPASAYLMKSPPEQLPDDIARAQLEEFIIG |
| 3WB9 Chain:A ((9-144)) | --------------KLRVAVVGYGNVGRYALEAVQA--A--------------------PDMELVGVVRRKV-LA-A-TPP----EL-----------TGVRV-----------------------VTDISQLEG---VQGALLCVPTRS---VPEYAEAMLRRGIHTVDSYDIHGDLADLRRRLDPVAREHGAAAVISAGW--DPGTDSIIRALLEFMAP------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WB9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92771 for 920 contacts (-100.8/contact) +
2D Compatibility (PS) -13841 + (NN) 1179 + (LL) 13804
1D Compatibility (HY) -2400 + (ID) 1250
Total energy: -95279.0 ( -103.56 by residue)
QMean score : 0.447
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