Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSPGSRRASPQSAREVVELDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVIGRTRLTAKVSVAVRSSADAGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVAR-YQRLLHPWVNMAMDTVVAIEPEIVTGIRIVADSRTP
3CP3 Chain:A ((10-140))
-------------DPITILDSSDSLSRLSSESVGRLVVHRKDDLDIFPVNFVLDYSAEQPRVYFRTATKLFSVNLNS---DVLFEVDRFDE----GWSVVLKGNAYVVRDTEEARHADTLGLKPWLPTLKYNFVRIDVREVSGRAFV------
General information:
TITO was launched using:
RESULT:
Template:
3CP3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61322 for 842 contacts (-72.8/contact) +
2D Compatibility (PS) -13854 + (NN) -3686 + (LL) 820
1D Compatibility (HY) -4800 + (ID) 1750
Total energy: -84592.0 ( -100.47 by residue)
QMean score : 0.416
(partial model without unconserved sides chains):
PDB file :
Tito_3CP3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CP3-query.scw
PDB file :
Tito_Scwrl_3CP3.pdb
: