Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGEFDPKLRFAQSPVARLATSTPDGTPHLVPVVFALGARRPAEATGADVIYTAVDAKRKTTQRLRRLANLEHNPRASVLVDSYADDWTQLWWVRADGVAAIHRDGEVMRAAYRLLRAKYAQYQSVPLNGPVIAIAVQRWASWHA
2ASF Chain:A ((11-131))
--SDDALAFLSERHLAMLTTLRADNSPHVVAVGFTFDPK-------THIARVITT------GGSQKAVNADRSGLAVLSQVDG---A---RWLSLEGRAAVNSDIDAVRDAELRYAQRYRTPR-PNPRRVVIEVQIERVLGSA-
General information:
TITO was launched using:
RESULT:
Template:
2ASF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -88339 for 891 contacts (-99.1/contact) +
2D Compatibility (PS) -13204 + (NN) -7729 + (LL) 1200
1D Compatibility (HY) 400 + (ID) 1150
Total energy: -108822.0 ( -122.13 by residue)
QMean score : 0.424
(partial model without unconserved sides chains):
PDB file :
Tito_2ASF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ASF-query.scw
PDB file :
Tito_Scwrl_2ASF.pdb
: