Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MTRSDTLATKLPWSDWLSRQRWYAGRNRELATV-KPGVVVALRHNLDLVLVDVTYTDGATERYQVLVGWDFEPASEYGTKAAIGVADDRTGFDALYDVAGPQFLLSLIVSSA-VCGTSTGEVTFTREPDVELP--FAAQPRVCDAEQSNTSVIFDRRAILKVFRRVSSGINPDIELNRVLTRAGNPHVARLLGAYQFGRPNRSPTDALAYALGMVTEYEANAAEGWAMATASVRD--------LFAEGDLYAHEVGGDFAGESYRLGEAVASVHATLADS---LGTAQATFPVDRMLARLSSTVAVV--PELREYAPTIEQQ-FQKLAAEAITVQRVHGDLH-LGQVLRTPESWLLI----DFEGEPGQPLDERRAPDSPLRDVAGVLRSFEYAAYGPLVDQATDKQLAARAREWVERNRAAFCDGYAVASGIDPRDSALLLGAYELDKAVYETGYETRHRPGWLPIPLRSIARLTAS |
| 4HU8 Chain:A ((3-452)) | NEITLTIGQQKDLASMVP-AKFAGQELSWTSSDPETASVTDKGIVTALKFSSGGANLFLKAPATGEAIITVTAG---KQSHSVKVITTVKGKEDIEKLPPLKDHFKDYFLIGNIFNNRDVSGSMMDNDWLAHHYAILTPENHMKPSNLTNNRNETTGEITYTFSTADRMVNAAIAEGLKIHGHTLLWHQQIPPWQRSMES----AAKDAALSVMKKYITEVMTHYKGKIYSWDVLNEIFPDGRGDNWTTAMRPENPWFKSIGSDFVYEAYLAARQADP-NAILYYNDYNMDQAGKAALIAAMVRDVNAKYKQAYPRETRLLIEGIGMQSHHNMDVPASNIRNTINRYRELGVKISVSELDILCMGWSAFRGSTGQGADKDDMTIATNRNILD--QAYKFNEYMKLYLENSD--IIERVSMWGVSDRYSW------RSGGLP----LLFDADNKAKPAYYSFVRAREDYEAAKA----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HU8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -39306 for 3533 contacts (-11.1/contact) +
2D Compatibility (PS) -42656 + (NN) -798 + (LL) 2560
1D Compatibility (HY) -8400 + (ID) 3450
Total energy: -92050.0 ( -26.05 by residue)
QMean score : 0.197
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