Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKACVVKELSGPSGMVYTDIDEVSGDGGKVVIDVRAAGVCFPDLLLTKGEYQLKLTPPFVPGMETAGVVRSAPSD-AGFHVGERVSAF----------------------------GVLGGYAEQIAVPVANVVRSPVELDDAGAVSLLVNYNTMYFALARRAALRPGDTVLVLGAAGGVGTAAVQIAKAMQAGKVIAMVHREGAIDYVASLGADVVLPLTE-GWAQQVRDHTYGQGVDIVVDPIGGPTFDDALGVLAIDGKLLLIGFAAGAVPTLKVNRLLVRNISVVGVGWGEYLNAVPGSAALFAWGLNQLVFLG-LRPPPPQRYPLSEAQAALQSLDDGGVLGKVVLEP |
| 3S2E Chain:A ((3-338)) | MKAAVVRAFGAP--LTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGYSVNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYKGLKV-TDTRPGQWVVISG-IGGLGHVAVQYARAMGLR-VAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIG-GAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPGDF-GTPIFDVVLKGITIRGSIVGTR-----SD---LQESLD-FAAHGDVKATVS-TAKLDDVNDVFGRLREGKVEGRVVLDF |
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General information:
TITO was launched using:
| RESULT:
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Template: 3S2E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -281233 for 2708 contacts (-103.9/contact) +
2D Compatibility (PS) -33216 + (NN) -9366 + (LL) 792
1D Compatibility (HY) -14000 + (ID) 4050
Total energy: -341073.0 ( -125.95 by residue)
QMean score : 0.461
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