Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHTQVHTARLVHTADLDSETRQDIRQMVTGAFAGDFTETDWEHTL--GGMHALIWHHGAIIAHAAVIQRRLIYRGNALRCGYVE-GVAVRADWRGQRLVSA-LLDAVEQVMR----GAYQLGALSSSARARRLYASRGWLPWHGPTSVLAPTGPVRTPDDDGTVFVLPIDISLDTSAELMCDWRAGDVW
2PSW Chain:A ((2-156))
-----SKGSRIELGDVTPHNIKQLKRLNQVIFPVSYNDKFYKDVLEVGELAKLAYFNDIAVGAVC-----CRVDHSQNQKRLYIMTLGCLAPYRRLGIGTKMLNHVLNICEKDGTFDNIYLHVQISNESAIDFYRKFGF-------EIIETKKNYYKRIEPADAHVLQKNLK-----------------
General information:
TITO was launched using:
RESULT:
Template:
2PSW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87993 for 1040 contacts (-84.6/contact) +
2D Compatibility (PS) -15880 + (NN) -7826 + (LL) 2544
1D Compatibility (HY) -8000 + (ID) 750
Total energy: -117905.0 ( -113.37 by residue)
QMean score : 0.372
(partial model without unconserved sides chains):
PDB file :
Tito_2PSW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2PSW-query.scw
PDB file :
Tito_Scwrl_2PSW.pdb
: