Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTEIATTSGARSVGLLSVGAYRPERVVTNDEICQHIDSSDEWIYTRTGIKTRRFAADDESAASMATEACRRALSNAGLSAADIDGVIVTTNTHFLQTPPAAPMVAASLGAKGILGFDLSAGCAGFGYALGAAADMIRGGGAATMLVVGTEKLSPTIDMYDRGNCFIFADGAAAVVV--GETPFQGIGPTVAGSDGEQADAIRQ--DIDWITFAQNPSGPRPFVRLEGPAVFRWAAFKMGDVGRRAMDAAGVRPDQIDVFVPHQANSRINELLVKNLQLRPDAVVANDIEHTGNTSAASIPLAMAELLTTGAAKPG--DLALLIGYGAGLSYAAQVVRMPKG |
3IL5 Chain:B ((33-341)) | --------------------YVPENCVTNHQLSEMMDT-DEWIHSRTGISERRIVTQ-ENTSDLCHQVAKQLLEKSGKQASEIDFILVATVTPDFNMPSVACQVQGAIGATEAFAFDISAACSGFVYALSMAEKLVLSGRYQTGLVIGGETFSKMLDWTDRSTAVLFGDGAAGVLIEAAETPH--FLNEKLQADGQRWAALTSGYTINESPFYQGHKQASKTLQMEGRSIFD---FAIKDVSQNILSL--VTDETVDYLLLHQANVRIIDKIARKTKISREKFLTN-MDKYGNTSAASIPILLDEAVENGTLILGSQQRVVLTGFGGGLTWGSLLLTL--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3IL5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -197776 for 2711 contacts (-73.0/contact) +
2D Compatibility (PS) -32288 + (NN) -17808 + (LL) 1276
1D Compatibility (HY) -21200 + (ID) 4950
Total energy: -272746.0 ( -100.61 by residue)
QMean score : 0.590
|
|
|