Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSAVALPRVSGGHDEHGHLEEFRTDPIGLMQRV-RDECGDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYPFMTPIFGEGVVFDASPERRKEMLHNAA--LRGEQMKGHAATIEDQVRRMIA-DWGE-AGEIDLLDFFAELTIYTSSACLIGKKFRDQLDGR-FAKLYHELERGTDPLAYVDPYL---PIESFRRRDEARNGLVALVADIMNGRIANPPTDKSDRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELM--RHRDAYAAVIDELDELYGDGRSVSF-HALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPESYRNDHSKMVVQLAQPAC-VRYRRRTGV |
| 2WUZ Chain:A ((29-462)) | ----------------GHIVQFGKNPLEFMQRCKRDLKSGVFTISIGGQRVTIVGDPHEHSRFFSPRNEILSPREVYTIMTPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKFMAENWKEDEGVINLLEDCGAMIINTACQCLFGEDLRKRLNARHFAQLLSKMESSLIPAAVFMPWLLRLPLPQSARCREARAELQKILGEIIVAREKE-----NTSDLLGGLLKAVYRDGT-RMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEFPA---QLNYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPERDEKVDG-------AFIGFGAGVHKCIGQKFALLQVKTILATAFREYDFQLLR-DEVPDPDYHTMVVGPTLNQCLVKYTRK--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WUZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -264945 for 3489 contacts (-75.9/contact) +
2D Compatibility (PS) -44574 + (NN) -20285 + (LL) 692
1D Compatibility (HY) -36800 + (ID) 7100
Total energy: -373012.0 ( -106.91 by residue)
QMean score : 0.625
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