Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRHWPLFDLRITTPRLQLQLPTEELCDQLIDTILEGVHDPDRMPFSVPWTRASREDLPFNTLSHLWQQLAGFKRDDWSLPLAVLVDGRAVGVQALSSKDFPITRQVDSGSWLGLRYQGHGYGTEMRAAVLYFAFAELEAQVATSRSFVDNPASIAVSRRNGYRDNGLDRVARE--GAMAEALLFRLTRDDWQRHRTVEVRVDGFDRCRPLFGPLEPPRY
1S7K Chain:A ((3-178))
--------EIIPVSTTLELRAADESHVPALHQLVLK---N------------------TRKHVQGNILL---H-QRGYAKMYLIFCQNEMAGVLSFNAIE-PINKAAYIGYWLDESFQGQGIMSQSLQALMTHYARRGDIRRFVIKCRVDNQASNAVARRNHFTLEGCMKQAEYLNGDYHDVNMYARIIDA-----------------------------
General information:
TITO was launched using:
RESULT:
Template:
1S7K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28299 for 1135 contacts (-24.9/contact) +
2D Compatibility (PS) -16368 + (NN) -5079 + (LL) 3356
1D Compatibility (HY) -3200 + (ID) 1500
Total energy: -51090.0 ( -45.01 by residue)
QMean score : 0.310
(partial model without unconserved sides chains):
PDB file :
Tito_1S7K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S7K-query.scw
PDB file :
Tito_Scwrl_1S7K.pdb
: