Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MADQLTPHLEIPTAIKPRDGRFGSGPSKVRLEQLQTLTT-TAAALFGTSHRQAPVKNLVGRVRSGLAELFSLP-DGYEVILGNGGATAFWDAAAFGLID-KRSLHLTYGEFSAKFASAVSKNPFVGEPIIITSDPGSAPEPQT---DPSVDVIAWAHNETSTGVAVAVRRPEGS----DDALVVIDATSGAGGLPVDIAETDAYYFAPQKNFASDGGLWLAIMSPAALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQERPYTTPFVT-DPGLRSQVVGTIDFVDDVDAGTVAKILRANGIVDTEPYRKLGRNQLRVAMFPAVEPDDVSALTECVDWVVERL |
| 3FFR Chain:A ((2-361)) | ---------------MNNKIYFTPGPSELYPTVRQHMITALDEKIGVISHRSKKFEEVYKTASDNLKTLLELPSNY-EVLF-LASATEIWERIIQNCVEKKSFHCVN-GSFSKRFYEFAGELGR--EAYKEEAAFGKGFYPADITVPADAEIICLTHNETSSGVSMPVEDINTFRDKNKDALIFVDAVSSLPYPKFDWTKIDSVFFSVQKCFGLPAGLGVWILNDRVIEKSKALLAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQIS-ADGIRKQTEEKAALINTYIESS-KVFSFGVEDAKLRSM-TTIVANTT-MLPGEINKILEPFDMAVGAGYGSKKETQIRIANFPAHSLEQVHKLVQTLKEKI--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FFR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -158302 for 3039 contacts (-52.1/contact) +
2D Compatibility (PS) -38245 + (NN) -21379 + (LL) 1488
1D Compatibility (HY) -13200 + (ID) 4100
Total energy: -233738.0 ( -76.91 by residue)
QMean score : 0.436
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