Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVAVLSGAGISAESGVPTFRDDKNGLWARFDPYELSSTQGWLRNPERVWGWYLWRHYLVANVEPNDGHRAIAAW-----QDHAEVSVITQNVDDLHERAGSGAVHHLHGSLFEFRCARCG-------VPYTDAL-------PEMPEPAIEVEP-PVCD---CGGLIRPDIVWFGEPLPEEPWRSAVEATGSADVMVVVGTSAIVYPAAGLPDLALARGTAVIEVNPEPTPLSGSATISIRESASQALPGLLERLPALLK
4UTX Chain:B ((26-275))
--IAIITGAGVSAESGVPTFRG-PGGFWRKWQAQDLATPEAFSRDPSLVWEFYHYRREVMRSKMPNPAHLAIAECEARLGQQGRSVVIITQNIDELHHRAGSKHVYEIHGSLFKTRCMSCGEVKANHKSPICPALDGKGAPDPNTKEARIPVELLPRCERKSCNGLLRPHVVWFGETLDSDILTAVERELEKCDLCLVVGTSSIVYPAAMFAPQVASRGVPVAEFNMEC------FKYHFEGPCGSTLPPALE-------
General information:
TITO was launched using:
RESULT:
Template:
4UTX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101929 for 1725 contacts (-59.1/contact) +
2D Compatibility (PS) -23828 + (NN) -13381 + (LL) 788
1D Compatibility (HY) -18400 + (ID) 4750
Total energy: -161500.0 ( -93.62 by residue)
QMean score : 0.509
(partial model without unconserved sides chains):
PDB file :
Tito_4UTX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4UTX-query.scw
PDB file :
Tito_Scwrl_4UTX.pdb
: