Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -MLGNTIHVPCQPCRHGHGAPSRGLRGRPADRWPVARATPTLHVCPQNQGVGLDFVRKPEYGRLRWPAYPAGTNNDRLISMRDGGIVALPQLTDEQRAAALEKAAAARRARAELKDRLKRGGTNLTQVLKDAESDEVLGKMKVSALLEALPKVGKVKAQEIMTELEI-APTRRLRGLGDRQRKA---------LLEKFGSA-- |
4J38 Chain:A ((20-151)) | EFSKFTVKIKNK---------------DKSGNWT---DLGDLVVRKEENGIDTGLNA--------------GGHSATFFSLE-------------------------EEVVNNFVKVMTEGGSFKTSLYYGYKEEQSVING--------------IQNKEIITKIEKIDGTEYITFSGDKIKNSGDKVAEYAISLEELKKNLK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J38.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6586 for 841 contacts (-7.8/contact) +
2D Compatibility (PS) -12334 + (NN) -2352 + (LL) 4044
1D Compatibility (HY) -4800 + (ID) 950
Total energy: -22978.0 ( -27.32 by residue)
QMean score : 0.360
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