Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTQAATRPTNDAGQDGGNNSDILVVARQQVLQRGEGLNQDQVLAVLQLP-DDRLEELLALAHEVRMRWCGPEVEVEGIISLKTGGCPEDCHFCSQSGLFASPVRSAWLDIPSLVEAAKQTAKSGATEFCIVAAVRGPDERLM---AQVAAGIEAIRNEVEINIACSLGMLTAEQVDQLAARGVHRYNHNLETA-RSFFANVVTTHTWEERWQTLSMVRDAGMEVCCGGILGMGETLQQRAEFAAELAELGPDEVPLNFLNPRPGTPFADLEVMPVGDALKAVAAFRLALPRTMLRFAGGREITLGDL-GAKRGILGGINAVI-------VGNYLTTLGRPAEADLELLDELQMPLKALNASL---------- |
| 3T7V Chain:A ((12-348)) | -------------------------SLGDKVIEGYQLTDNDLRTLLSLESKEGLERLYSAARKVRDHYFGNRVFLNCFIYFSTY-CKNQCSFCYYNC--RNEINRYRLTMEEIKETCKTLKGAG---FHMVDLTMGEDPYYYEDPNRFVELVQIVKEELGLPIMISPGLMDNATLLKAREKGANFLALYQETYDTELYRKLRVGQSFDGRVNARRFAKQQGYCVEDGILTGVGNDIESTILSLRGMSTNDPDMVRVMTFLPQEGTPLEGFRDKSNLSELKIISVLRLMFPKRLIPAS----LDLEGIDGMVLRLNAGANIVTSILPPDSQLEGVANYDRDLEERDRDIKSVVRRLEIMGMKPARQADFEAVL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3T7V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -192731 for 2657 contacts (-72.5/contact) +
2D Compatibility (PS) -34962 + (NN) -23980 + (LL) 1044
1D Compatibility (HY) -16800 + (ID) 2950
Total energy: -270379.0 ( -101.76 by residue)
QMean score : 0.534
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